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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015790329.1_cds_XP_016501224.1_1419
CDS Infomation

[gene=LOC107819598] [db_xref=GeneID:107819598] [protein=U-box domain-containing protein 35-like isoform X4] [protein_id=XP_016501224.1] [location=join(19191..19413,20268..20386,20549..20667,20876..21090,21181..21244,22454..22631,23177..23278,23355..23783,23875..24633,24976..25104)] [gbkey=CDS]
Sequence

ATGTTTTGCAAGTTGAGACTGATCAAAAGGGAAAAGATGTGGCTCCCAAACAATAAGGGA
AGCCCTGCAAACAGAAGGGGCAATGGGACTGGAGTTGTTGCAATTGCTATTGACAAAGAT
AAAGGCAGCCAATATGCTATCAAATGGGCCACTGATAATTTGGTTAACAGAGGCCAAACT
CTCGTCCTTATTCATGTTGTCACCAAACCTGCTTCTTCTTCCTACGGAAATTGTGGTGGA
GTTCACGTCGTAGATGGAAATTTATCTGCACATGGGCAAAATCTTGAGAAGCAAACCAAA
GAATTGTTTCTTACCTTCCATTGTTTTTGTACACGTAAAGATATTCGTTGCTTAGATGTT
ATACTTGAAGACTCAGATGTAACAAAAGCACTGACAGAATATGTGTCTAGTGCTGCAATC
CAGAATTTGGTCCTTGGAGCATCTAGGCATGGCTTTATCAGACGGTTGAAGGTTACGGAT
ATACCTAGCACTGTATCAAAGGGAGCACCAGATTTCTGCACTGTTTATGTCATCTCAAAG
TCAAAGATTTCTTCTGTGAAAAATGCTTCTCGCCCAGCCCCCATGGCTTCCCCTCTTTAT
AAACAAATACAGCAATTGGAAGAACAAGTTAATAGTGCTGGAACTACCCCTACTGCTCGT
ACCAGGGCGATCCATGCTGGATCAGTTGTGGACAGGTCACAACGCAGGTCATTCATATCG
GATGAGAGCAAAAAAATTGGCTCTGGTAGGCCAAGCACTGATCACACATCTTCCATGCTG
TTTCATGATGGCATGGATTCTGGCCGTATTTCACAAATATCAACAAGTTCAGATAGTAGC
TTTGGCTCAGAACGCTTGGGACCTCGGGGGAGTGAGCTCAGTTCTTTCAATGACTTTTCA
TCTTCCTCCTTTGAGACTGATGATGGAGAGGCTGAAATGAGAAGGCTAAAGATGGAGCTT
CAGAGGACAATGGATTTGTACAGTACAGCATGCAAGGAAGCACTGACGGCGAAACAGAAG
TCAGAGGAGCTCAATGTCTGGCGGATGGAAGAGGAAAAGAGATTGGAGGAGGCTCGGCTT
GCAGAGGAAGCTGCAAAATTAGCAGCAGAGAAGGAGAGAGATAAGTGTAAGGTTGCTATG
GAAACTGCCGAAGCAGCTCAGAGACTCGCAGAACTTGAAGCAAAAAGAAGGGTAGATGCT
GAAATGCAAGCCCTTAAAGAGGCAGAGCAGAAGGAGAAAGCATTGATGAACTTAGGTCAA
GGTGATTTCAGATATAGGAGGTACAGCATCGAAGAAATCGAAGAGGCAACACAATTTTTC
ACTGACTCTCTCAAGATTGGAGAAGGAGGATATGGTCCTGTCTACAAATGTTATCTTGAT
CACACACCAGTAGCAATCAAGGTTTTACGTCCAGATGCAGCACAAGGAAGATCTCAATTT
CAGCAAGAGGTTGAAGTGCTGAGTCGTATGAGGCATCCTAATATGGTTCTACTTCTTGGA
GCTTGCCCAGAATATGGCTGTTTGGTATATGAGTACATGGCAAATGGCAGTTTAGAGGAA
CGGCTTATGCGACGTGGAGATAAACGTTCACTGTCATGGCAGCTTAGATTTCGTATTGCA
GCGGAGATCGCCACCGGCTTGCTCTTTCTGCACCAGACCAAGCCAGAACCTCTGGTGCAT
CGTGACCTTAAACCTGGCAACATTCTGCTTGACCATAATTATGTAAGCAAGATTAGTGAT
GTTGGACTCTCAAGGCTTGTTCCTCCTTCTACTACCGAAGAGGTAACACAATACCGGATA
ACATCTGCAGCTGGCACCTTCTGCTACATCGATCCAGAGTATCAACAAACAGGCATGCTT
GGGGTTAAATCTGATGTTTATTCTTTAGGAATTCTTCTTCTACAATTGGTAACAGCCAAG
CCAGCAATGGGCATAACTCATTATGTTTCACAATGCATTGAGACTGGAGAGTTTAAAGAG
GCACTAGATCCTTCTGTTCCAGATTGGCCAATCGAAGAGGCCCTCAATTTTGCAAACCTA
GCACTCCAATGTGCAGAACTGAGGCGGAAGGACAGGCCAGACCTGGGCAAAGTCGTCTTG
CCCGAGCTCAATCGATTGAGAGCATTGACTGAAGAAAATATGGGTCAACTGTTGATAGGT
GGCAGTGCTGGCCCCTCCCCCAGTCACAGCCAAGCATCTATATCGCAGGAAATGTCAAGT
GACCCTCAAGTGCGTTCAGGATTTAGTTCAAAAAGTGTTTCAAATTCATCTGCTTCGCAA
GAAAAACATTCAGGTACTTTCAACGTTGTATTGGTGCAAGGAAAAGAGAAGTGCTAG

Peptide Sequence

PEP ID

XP_016501224.1
PEP Infomation

PREDICTED: U-box domain-containing protein 35-like isoform X4 [Nicotiana tabacum]
Sequence

MFCKLRLIKREKMWLPNNKGSPANRRGNGTGVVAIAIDKDKGSQYAIKWATDNLVNRGQT
LVLIHVVTKPASSSYGNCGGVHVVDGNLSAHGQNLEKQTKELFLTFHCFCTRKDIRCLDV
ILEDSDVTKALTEYVSSAAIQNLVLGASRHGFIRRLKVTDIPSTVSKGAPDFCTVYVISK
SKISSVKNASRPAPMASPLYKQIQQLEEQVNSAGTTPTARTRAIHAGSVVDRSQRRSFIS
DESKKIGSGRPSTDHTSSMLFHDGMDSGRISQISTSSDSSFGSERLGPRGSELSSFNDFS
SSSFETDDGEAEMRRLKMELQRTMDLYSTACKEALTAKQKSEELNVWRMEEEKRLEEARL
AEEAAKLAAEKERDKCKVAMETAEAAQRLAELEAKRRVDAEMQALKEAEQKEKALMNLGQ
GDFRYRRYSIEEIEEATQFFTDSLKIGEGGYGPVYKCYLDHTPVAIKVLRPDAAQGRSQF
QQEVEVLSRMRHPNMVLLLGACPEYGCLVYEYMANGSLEERLMRRGDKRSLSWQLRFRIA
AEIATGLLFLHQTKPEPLVHRDLKPGNILLDHNYVSKISDVGLSRLVPPSTTEEVTQYRI
TSAAGTFCYIDPEYQQTGMLGVKSDVYSLGILLLQLVTAKPAMGITHYVSQCIETGEFKE
ALDPSVPDWPIEEALNFANLALQCAELRRKDRPDLGKVVLPELNRLRALTEENMGQLLIG
GSAGPSPSHSQASISQEMSSDPQVRSGFSSKSVSNSSASQEKHSGTFNVVLVQGKEKC

Transcript Sequence

Gene sequence data has not been registered.